Package: gson 0.2.2
Guangchuang Yu
gson: Base Class and Methods for 'gson' Format
Provides a lightweight container and exchange format for gene set collections. A 'GSON' object stores which genes belong to which gene set, together with gene set and gene names, the identifier types in use, species, versions and source metadata. A collection can be built from data frames, read from and written to the 'gson' JavaScript Object Notation (JSON) format and the 'GMT' format, subset by gene set, merged across sources, validated, and resolved to the web addresses of the databases it comes from, so that a collection gathered by one package can be analysed by another.
Authors:
gson_0.2.2.tar.gz
gson_0.2.2.zip(r-4.7-any)gson_0.2.2.zip(r-4.6-any)gson_0.2.2.zip(r-4.5-any)
gson_0.2.2.tgz(r-4.6-any)gson_0.2.2.tgz(r-4.5-any)
gson_0.2.2.tar.gz(r-4.7-any)gson_0.2.2.tar.gz(r-4.6-any)
gson_0.2.2.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
gson/json (API)
| # Install 'gson' in R: |
| install.packages('gson', repos = c('https://yulab-smu.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/yulab-smu/gson/issues
Last updated from:e7863f2f4b. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel | OK | 113 | ||
| source / vignettes | OK | 127 | ||
| linux-release | OK | 99 | ||
| macos-release | OK | 100 | ||
| macos-oldrel | OK | 108 | ||
| windows-devel | OK | 65 | ||
| windows-release | OK | 81 | ||
| windows-oldrel | OK | 69 | ||
| wasm-release | OK | 80 |
Exports:browseGSgsongson_uniongson_urlgsonListread.gmtread.gmt.wpread.gsonshowvalidate_gsonwrite.gmtwrite.gson
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Subset a GSON object | [.GSON [[.GSON |
| Coerce GSON to a data frame | as.data.frame.GSON |
| construct a 'GSON' object | gson |
| Combine gene set collections | gson_union |
| URLs of the gene sets of a GSON | browseGS gson_url |
| Class "GSON" This class represents gene set information. | GSON-class show,GSON-method |
| construct a 'GSONList' object | gsonList |
| read.gmt | read.gmt read.gmt.wp write.gmt |
| read and write gson file | read.gson write.gson |
| show method | show |
| Validate a GSON object | validate_gson |