NEWS
yulab.utils 0.2.4.001
- improve chunked_array correctness/performance and API (2026-02-11, Wed)
- fix
length() for empty chunked_array
- make
[ support NA/negative/logical indices and speed up multi-extract
- make
c2() preserve chunked_array type when one side is empty
- export
as_chunked_array() and add c.chunked_array()
yulab.utils 0.2.4 (2026-02-02)
- stabilize cache TTL unit test for r-devel checks (2026-02-02, Mon)
yulab.utils 0.2.3 (2025-12-15)
download_yulab_file (2025-12-15, Mon)
- add unit test (2025-12-08, Mon)
- Extend cache system with TTL, pruning, persistence and memoization (2025-12-08, Mon)
update_cache_item(item, elements, ttl=) sets per-entry expiration
get_cache_element(item, elements, default=, prune_expired=) supports default values and auto-pruning of expired entries
with_cache(item, key, compute, ttl=) computes and caches results (returns cached value on hit)
prune_cache_item(item) prunes expired entries; rm_cache_entry(item, key) removes a single entry
cache_list_items() and cache_size() list items and estimate total cache size
cache_save(path) and cache_load(path) serialize and restore the cache environment
- update man (2025-12-08, Mon)
load_OrgDb() to load OrgDb object (2025-12-04, Thu)
parse_ratio to parse ratio string, e.g., "1/2" (2025-12-04, Thu)
- set
check_pkg as an alias of check_packages (2025-12-01, Mon)
yulab.utils 0.2.2 (2025-12-01)
- add error handling functions (2025-12-01, Mon)
yulab_abort()
yulab_warn()
yulab_inform()
- check input validity with detailed error messages (2025-12-01, Mon)
check_input()
check_package()
check_file()
check_range()
check_directory()
quiet() to suppress messages and output from x (2025-12-01, Mon)
- add
subdir parameter in install_zip and install_zip_gh (2025-09-09, Tue)
where return the full path of a command, "" if not found (2025-09-01, Mon)
- internally call
which for OSX and Linux and where for Windows
yulab.utils 0.2.1 (2025-08-19)
- export
user_dir() (2025-08-16, Sat)
yulab.utils 0.2.0 (2025-01-29)
- bug fixed in
get_caller_package() (2025-01-08, Wed)
yulab.utils 0.1.9 (2025-01-07)
c2() to concate two vectors into a 'chunked_array' object (2024-12-03, Tue)
yulab.utils 0.1.8 (2024-11-07)
- add new citation (The Innovation 2024) (2024-11-07, Thu)
pload() now supports github package (2024-11-06, Wed)
- bug fixed in
pkg_ref() (2024-08-26, Mon)
yulab.utils 0.1.7 (2024-08-26)
has_internet() for testing internet connection (2024-08-26, Mon)
pkg_ref() to access textVersion of package reference (2024-08-21, Wed)
- export
str_detect() (20024-08-19, Mon)
user_dir() to setup user data dir (20024-08-17, Sat)
which_os() to return the system name
has_bin() to check whether a command is exist in the system
yulab.utils 0.1.6 (2024-08-17)
mydownload() for downloading online file (2024-08-17, Sat)
- internally use 'httr2' and is 'https' friendly
- update
bib_ggtree() and bib_knowledge() with all previous related publications (2024-08-12, Mon)
- remove memory caching and disable file cache by default in
yread() and yread_tsv() (2024-07-27, Sat)
bib_ggtree() and bib_knowledge() (2024-07-27, Sat)
yulab.utils 0.1.5 (2024-07-26)
yulab_msg() for startup message of packages developed by YuLab (2024-07-26, Fri)
yulab.utils 0.1.4 (2024-01-28)
str_extract() to extract substring using a regular expression pattern (2024--01-25, Thu)
yulab.utils 0.1.3 (2024-01-08)
- with cache ability (2023-12-27, Wed)
initial_cache()
initial_cache_item()
get_cache()
get_cache_item()
get_cache_element()
rm_cache_item()
rm_cache()
yulab.utils 0.1.2 (2023-12-22)
- mv translate functions to the 'fanyi' package (2023-12-14, Thu)
- tools to switch from PCRE or TRE in regular expression (2023-12-13, Wed)
yulab.utils 0.1.1 (2023-12-11)
- use
normalizePath() in o() to convert file paths to canonical form (2023-10-06, Fri, #4)
- change the default parameter,
ref = "master" to ref = "HEAD" in the install_zip_gh() function to use the default branch of the GitHub repo (2023-10-02, Mon)
yulab.utils 0.1.0 (2023-09-20)
install_zip() allows both binary and source zip files (2023-09-20, Wed)
pload() for loading package with the ability to install it if not available (2023-09-16, Sat)
get_dependencies() and packageTitle() (2023-09-11, Mon)
- import 'fs' and 'digest' (2023-09-07, Thu)
yulab.utils 0.0.9 (2023-09-01)
ls2df() convert list of vector to a data.frame (2023-09-01, Fri)
yulab.utils 0.0.8 (2023-08-22)
mat2list() and combinations() (2023-08-22, Tue)
- remove default 'params' setting in
yread_tsv() (2023-08-15, Tue)
yulab.utils 0.0.7 (2023-08-09)
- update
check_pkg() to call rlang::check_installed() with reason set automatically (2023-08-03, Thu)
yread() and yread_tsv() that read file with caching (2023-08-02, Wed)
rbindlist() to rbind a list (2023-08-01, Tue)
exec() to run system command (2023-06-19, Mon)
scale_range() to normalize data by range (2023-06-18, Sun)
yulab.utils 0.0.6 (2022-12-20)
mat2df() to convert matrix to a tidy data frame (2022-12-20, Tue)
str_starts() and str_ends() (2022-07-29, Fri)
yulab.utils 0.0.5 (2022-06-30)
get_fun_from_pkg() outputs friendly message if the pkg is not installed (2022-06-08, Wed)
show_in_excel(), CRANpkg(), Biocpkg(), Githubpkg(), mypkg() (2021-10-13, Wed)
yulab.utils 0.0.4 (2021-10-09)
str_wrap() (2021-10-09, Sat)
yulab.utils 0.0.3
yulab.utils 0.0.2 (2021-08-16)
o(), install_zip(), get_fun_from_pkg()
yulab.utils 0.0.1
is.installed(), scihub_dl(), sudo_install()