Overview | Setup | A minimal input object | Build a single pathway plot with pipes | Prepare plotting values with wp_map() | Compare two conditions with wp_comparefill() | Render multiple pathways with wp_render() | A typical analysis pattern | Summary
Package: wikiprofiler 0.1.7
Guangchuang Yu
wikiprofiler: Data Integration and Visualization on 'WikiPathways' Graphics
Retrieves pathway graphics from 'WikiPathways' and maps user-supplied quantitative data, such as gene expression values, onto pathway nodes. Provides a pipe-friendly grammar for building pathway visualizations with layered fills, text highlighting, condition-wise comparisons, data preparation helpers, and batch rendering utilities.
Authors:
wikiprofiler_0.1.7.tar.gz
wikiprofiler_0.1.7.zip(r-4.7-any)wikiprofiler_0.1.7.zip(r-4.6-any)wikiprofiler_0.1.7.zip(r-4.5-any)
wikiprofiler_0.1.7.tgz(r-4.6-any)wikiprofiler_0.1.7.tgz(r-4.5-any)
wikiprofiler_0.1.7.tar.gz(r-4.7-any)wikiprofiler_0.1.7.tar.gz(r-4.6-any)
wikiprofiler_0.1.7.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
wikiprofiler/json (API)
| # Install 'wikiprofiler' in R: |
| install.packages('wikiprofiler', repos = c('https://yulab-smu.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/yulab-smu/wikiprofiler/issues
Last updated from:f9dc0fd4d2. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel | OK | 200 | ||
| source / vignettes | OK | 268 | ||
| linux-release | OK | 199 | ||
| macos-release | OK | 179 | ||
| macos-oldrel | OK | 177 | ||
| windows-devel | OK | 156 | ||
| windows-release | OK | 153 | ||
| windows-oldrel | OK | 146 | ||
| wasm-release | OK | 184 |
Exports:ggsaveread.wpwp_bgfillwp_comparefillwp_mapwp_renderwp_shadowtextwpplotwpsave
Dependencies:clicpp11digestfarverfsggplot2ggplotifygluegridGraphicsgsongtableisobandjsonlitelabelinglifecycleR6rappdirsRColorBrewerrlangrsvgS7scalesvctrsviridisLitewithryulab.utils
